Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TPM3P06753 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TPM3P06753 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.26■■□□□ 1.31
TPM3P06753 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TPM3P06753 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.25■■□□□ 1.31
TPM3P06753 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.25■■□□□ 1.31
TPM3P06753 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TPM3P06753 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.25■■□□□ 1.31
TPM3P06753 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TPM3P06753 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
TPM3P06753 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.25■■□□□ 1.31
TPM3P06753 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.25■■□□□ 1.31
TPM3P06753 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TPM3P06753 BX323043.1-201ENST00000641006 1765 ntBASIC23.24■■□□□ 1.31
TPM3P06753 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.24■■□□□ 1.31
TPM3P06753 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.24■■□□□ 1.31
TPM3P06753 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM3P06753 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM3P06753 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TPM3P06753 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.24■■□□□ 1.31
TPM3P06753 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TPM3P06753 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.24■■□□□ 1.31
TPM3P06753 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TPM3P06753 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TPM3P06753 AL020996.1-203ENST00000536896 2307 ntBASIC23.24■■□□□ 1.31
TPM3P06753 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.23■■□□□ 1.31
TPM3P06753 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TPM3P06753 SMG8-203ENST00000578922 2178 ntBASIC23.23■■□□□ 1.31
TPM3P06753 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TPM3P06753 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.23■■□□□ 1.31
TPM3P06753 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 AL356740.2-201ENST00000601559 647 ntBASIC23.23■■□□□ 1.31
TPM3P06753 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TPM3P06753 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC23.23■■□□□ 1.31
TPM3P06753 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.23■■□□□ 1.31
TPM3P06753 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TPM3P06753 AC020907.5-201ENST00000624372 1936 ntBASIC23.22■■□□□ 1.31
TPM3P06753 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TPM3P06753 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 KRT16P3-201ENST00000439127 1283 ntBASIC23.22■■□□□ 1.31
TPM3P06753 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM3P06753 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TPM3P06753 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.22■■□□□ 1.31
TPM3P06753 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.21■■□□□ 1.31
TPM3P06753 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TPM3P06753 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.21■■□□□ 1.31
TPM3P06753 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.21■■□□□ 1.31
TPM3P06753 AC027702.1-201ENST00000563810 1770 ntBASIC23.21■■□□□ 1.31
TPM3P06753 PLK5-205ENST00000642079 1969 ntBASIC23.21■■□□□ 1.31
TPM3P06753 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.21■■□□□ 1.31
TPM3P06753 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TPM3P06753 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TPM3P06753 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TPM3P06753 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TPM3P06753 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 SRD5A1P1-201ENST00000442297 786 ntBASIC23.2■■□□□ 1.3
TPM3P06753 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.2■■□□□ 1.3
TPM3P06753 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.2■■□□□ 1.3
TPM3P06753 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TPM3P06753 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TPM3P06753 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TPM3P06753 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms