Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAPDHP04406 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAPDHP04406 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GAPDHP04406 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GAPDHP04406 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
GAPDHP04406 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAPDHP04406 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.34■□□□□ 0.37
GAPDHP04406 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.34■□□□□ 0.37
GAPDHP04406 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.34■□□□□ 0.37
GAPDHP04406 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAPDHP04406 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.34■□□□□ 0.37
GAPDHP04406 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAPDHP04406 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.34■□□□□ 0.37
GAPDHP04406 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GAPDHP04406 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.34■□□□□ 0.37
GAPDHP04406 AC012414.1-201ENST00000556676 535 ntBASIC17.34■□□□□ 0.37
GAPDHP04406 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GAPDHP04406 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.33■□□□□ 0.37
GAPDHP04406 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAPDHP04406 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
GAPDHP04406 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.33■□□□□ 0.37
GAPDHP04406 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAPDHP04406 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.33■□□□□ 0.37
GAPDHP04406 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAPDHP04406 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.33■□□□□ 0.37
GAPDHP04406 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAPDHP04406 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAPDHP04406 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.33■□□□□ 0.36
GAPDHP04406 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.33■□□□□ 0.36
GAPDHP04406 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.33■□□□□ 0.36
GAPDHP04406 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GAPDHP04406 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAPDHP04406 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GAPDHP04406 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.33■□□□□ 0.36
GAPDHP04406 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GAPDHP04406 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.33■□□□□ 0.36
GAPDHP04406 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.33■□□□□ 0.36
GAPDHP04406 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.33■□□□□ 0.36
GAPDHP04406 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAPDHP04406 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
GAPDHP04406 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.33■□□□□ 0.36
GAPDHP04406 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.32■□□□□ 0.36
GAPDHP04406 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GAPDHP04406 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.32■□□□□ 0.36
GAPDHP04406 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GAPDHP04406 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GAPDHP04406 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAPDHP04406 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.31■□□□□ 0.36
GAPDHP04406 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GAPDHP04406 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.31■□□□□ 0.36
GAPDHP04406 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GAPDHP04406 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 AC104564.3-201ENST00000582367 638 ntBASIC17.31■□□□□ 0.36
GAPDHP04406 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.31■□□□□ 0.36
GAPDHP04406 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.31■□□□□ 0.36
GAPDHP04406 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GAPDHP04406 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GAPDHP04406 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAPDHP04406 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GAPDHP04406 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.3■□□□□ 0.36
GAPDHP04406 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GAPDHP04406 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
GAPDHP04406 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAPDHP04406 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GAPDHP04406 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GAPDHP04406 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
GAPDHP04406 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms