Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 AC034268.1-201ENST00000441047 882 ntBASIC21.09■□□□□ 0.97
MT-ND3P03897 YBX1P1-201ENST00000445822 960 ntBASIC21.09■□□□□ 0.97
MT-ND3P03897 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND3P03897 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 AL121603.2-201ENST00000557373 2117 ntBASIC21.09■□□□□ 0.97
MT-ND3P03897 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.09■□□□□ 0.97
MT-ND3P03897 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND3P03897 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND3P03897 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND3P03897 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 MIR572-201ENST00000384983 95 ntBASIC21.08■□□□□ 0.97
MT-ND3P03897 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.08■□□□□ 0.97
MT-ND3P03897 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.08■□□□□ 0.97
MT-ND3P03897 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND3P03897 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MT-ND3P03897 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MT-ND3P03897 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND3P03897 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND3P03897 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND3P03897 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MT-ND3P03897 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND3P03897 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND3P03897 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
MT-ND3P03897 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
MT-ND3P03897 GABARAPL3-202ENST00000624044 1851 ntBASIC21.07■□□□□ 0.96
MT-ND3P03897 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND3P03897 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.06■□□□□ 0.96
MT-ND3P03897 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.06■□□□□ 0.96
MT-ND3P03897 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
MT-ND3P03897 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.06■□□□□ 0.96
MT-ND3P03897 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.06■□□□□ 0.96
MT-ND3P03897 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 AL354811.1-201ENST00000610286 706 ntBASIC21.06■□□□□ 0.96
MT-ND3P03897 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.06■□□□□ 0.96
MT-ND3P03897 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.06■□□□□ 0.96
MT-ND3P03897 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND3P03897 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-ND3P03897 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-ND3P03897 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
MT-ND3P03897 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
MT-ND3P03897 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
MT-ND3P03897 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 AC027612.3-201ENST00000413684 1047 ntBASIC21.05■□□□□ 0.96
MT-ND3P03897 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-ND3P03897 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND3P03897 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.05■□□□□ 0.96
MT-ND3P03897 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms