Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
KRT6AP02538 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.1■□□□□ 0.81
KRT6AP02538 MIR6084-201ENST00000622012 110 ntBASIC20.1■□□□□ 0.81
KRT6AP02538 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT6AP02538 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
KRT6AP02538 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT6AP02538 PLK5-205ENST00000642079 1969 ntBASIC20.1■□□□□ 0.81
KRT6AP02538 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT6AP02538 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT6AP02538 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 AC079140.4-201ENST00000507448 529 ntBASIC20.09■□□□□ 0.81
KRT6AP02538 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.09■□□□□ 0.81
KRT6AP02538 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT6AP02538 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KRT6AP02538 LINC01521-201ENST00000504184 1943 ntBASIC20.08■□□□□ 0.81
KRT6AP02538 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT6AP02538 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT6AP02538 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT6AP02538 AC105265.2-201ENST00000467189 838 ntBASIC20.08■□□□□ 0.81
KRT6AP02538 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.08■□□□□ 0.81
KRT6AP02538 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.08■□□□□ 0.81
KRT6AP02538 AC008175.2-201ENST00000612840 297 ntBASIC20.08■□□□□ 0.81
KRT6AP02538 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.08■□□□□ 0.8
KRT6AP02538 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT6AP02538 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT6AP02538 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
KRT6AP02538 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT6AP02538 AL157384.1-201ENST00000445995 2473 ntBASIC20.08■□□□□ 0.8
KRT6AP02538 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 KRT87P-202ENST00000534226 1464 ntBASIC20.07■□□□□ 0.8
KRT6AP02538 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT6AP02538 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT6AP02538 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT6AP02538 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT6AP02538 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT6AP02538 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 POU5F1P4-201ENST00000413175 1085 ntBASIC20.06■□□□□ 0.8
KRT6AP02538 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 AC061975.6-201ENST00000579045 1553 ntBASIC20.06■□□□□ 0.8
KRT6AP02538 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KRT6AP02538 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT6AP02538 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT6AP02538 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
KRT6AP02538 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
KRT6AP02538 FEM1AP1-201ENST00000431297 1995 ntBASIC20.05■□□□□ 0.8
KRT6AP02538 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT6AP02538 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT6AP02538 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
KRT6AP02538 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT6AP02538 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT6AP02538 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT6AP02538 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms