Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.81■■□□□ 1.08
TRUB2O95900 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.81■■□□□ 1.08
TRUB2O95900 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.81■■□□□ 1.08
TRUB2O95900 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.81■■□□□ 1.08
TRUB2O95900 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.81■■□□□ 1.08
TRUB2O95900 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 AC011767.1-201ENST00000617410 1153 ntBASIC21.81■■□□□ 1.08
TRUB2O95900 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TRUB2O95900 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TRUB2O95900 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRUB2O95900 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.8■■□□□ 1.08
TRUB2O95900 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
TRUB2O95900 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB2O95900 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB2O95900 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB2O95900 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.8■■□□□ 1.08
TRUB2O95900 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB2O95900 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.8■■□□□ 1.08
TRUB2O95900 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
TRUB2O95900 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRUB2O95900 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.8■■□□□ 1.08
TRUB2O95900 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRUB2O95900 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.8■■□□□ 1.08
TRUB2O95900 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
TRUB2O95900 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.79■■□□□ 1.08
TRUB2O95900 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.79■■□□□ 1.08
TRUB2O95900 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.79■■□□□ 1.08
TRUB2O95900 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.79■■□□□ 1.08
TRUB2O95900 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
TRUB2O95900 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRUB2O95900 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.78■■□□□ 1.08
TRUB2O95900 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.78■■□□□ 1.08
TRUB2O95900 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.78■■□□□ 1.08
TRUB2O95900 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRUB2O95900 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.77■■□□□ 1.08
TRUB2O95900 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TRUB2O95900 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.77■■□□□ 1.08
TRUB2O95900 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRUB2O95900 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.77■■□□□ 1.08
TRUB2O95900 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.77■■□□□ 1.07
TRUB2O95900 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.76■■□□□ 1.07
TRUB2O95900 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.76■■□□□ 1.07
TRUB2O95900 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
TRUB2O95900 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.76■■□□□ 1.07
TRUB2O95900 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.76■■□□□ 1.07
TRUB2O95900 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRUB2O95900 AC080038.1-201ENST00000611274 1154 ntBASIC21.76■■□□□ 1.07
TRUB2O95900 AC010536.3-201ENST00000620306 533 ntBASIC21.76■■□□□ 1.07
TRUB2O95900 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.76■■□□□ 1.07
TRUB2O95900 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRUB2O95900 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
TRUB2O95900 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms