Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.62■□□□□ 0.89
CBX6O95503 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 AL020996.1-203ENST00000536896 2307 ntBASIC20.62■□□□□ 0.89
CBX6O95503 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CBX6O95503 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CBX6O95503 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX6O95503 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 AC009102.2-201ENST00000606772 1639 ntBASIC20.61■□□□□ 0.89
CBX6O95503 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CBX6O95503 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CBX6O95503 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX6O95503 AC136469.2-201ENST00000623944 1028 ntBASIC20.61■□□□□ 0.89
CBX6O95503 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CBX6O95503 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
CBX6O95503 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
CBX6O95503 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBX6O95503 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CBX6O95503 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.6■□□□□ 0.89
CBX6O95503 AC233992.3-201ENST00000607491 485 ntBASIC20.6■□□□□ 0.89
CBX6O95503 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.6■□□□□ 0.89
CBX6O95503 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CBX6O95503 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.6■□□□□ 0.89
CBX6O95503 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CBX6O95503 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.59■□□□□ 0.89
CBX6O95503 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 AC034268.1-201ENST00000441047 882 ntBASIC20.59■□□□□ 0.89
CBX6O95503 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.59■□□□□ 0.89
CBX6O95503 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 AC241377.3-202ENST00000626088 1088 ntBASIC20.59■□□□□ 0.89
CBX6O95503 AC241585.3-202ENST00000628937 1088 ntBASIC20.59■□□□□ 0.89
CBX6O95503 AC245100.8-202ENST00000629247 1058 ntBASIC20.59■□□□□ 0.89
CBX6O95503 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CBX6O95503 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.59■□□□□ 0.89
CBX6O95503 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBX6O95503 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CBX6O95503 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CBX6O95503 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.89
CBX6O95503 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CBX6O95503 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CBX6O95503 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBX6O95503 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.58■□□□□ 0.89
CBX6O95503 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.58■□□□□ 0.89
CBX6O95503 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBX6O95503 AC022517.1-201ENST00000592429 346 ntBASIC20.58■□□□□ 0.89
CBX6O95503 IKBKGP1-201ENST00000612193 1073 ntBASIC20.58■□□□□ 0.89
CBX6O95503 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.58■□□□□ 0.89
CBX6O95503 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBX6O95503 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CBX6O95503 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms