Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX4O95219 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX4O95219 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX4O95219 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX4O95219 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 KRT18P61-201ENST00000585825 1298 ntBASIC19.44■□□□□ 0.7
SNX4O95219 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX4O95219 AL137784.2-201ENST00000607332 1000 ntBASIC19.44■□□□□ 0.7
SNX4O95219 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SNX4O95219 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX4O95219 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX4O95219 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX4O95219 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 AC010542.4-201ENST00000563151 1910 ntBASIC19.43■□□□□ 0.7
SNX4O95219 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX4O95219 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX4O95219 AC137761.2-201ENST00000561729 223 ntBASIC19.43■□□□□ 0.7
SNX4O95219 AC145350.3-201ENST00000569033 163 ntBASIC19.43■□□□□ 0.7
SNX4O95219 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX4O95219 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
SNX4O95219 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
SNX4O95219 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX4O95219 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX4O95219 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX4O95219 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX4O95219 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX4O95219 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SNX4O95219 AC007952.6-201ENST00000573168 2673 ntBASIC19.42■□□□□ 0.7
SNX4O95219 AC003957.1-201ENST00000625108 2673 ntBASIC19.42■□□□□ 0.7
SNX4O95219 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNX4O95219 AC016769.1-201ENST00000409132 1010 ntBASIC19.42■□□□□ 0.7
SNX4O95219 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX4O95219 AC053503.5-201ENST00000601508 636 ntBASIC19.42■□□□□ 0.7
SNX4O95219 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SNX4O95219 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX4O95219 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX4O95219 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SNX4O95219 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 KRT18P11-201ENST00000435214 1283 ntBASIC19.41■□□□□ 0.7
SNX4O95219 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX4O95219 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SNX4O95219 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SNX4O95219 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX4O95219 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
SNX4O95219 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX4O95219 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX4O95219 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX4O95219 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX4O95219 EEF1DP3-203ENST00000566025 782 ntBASIC19.4■□□□□ 0.7
SNX4O95219 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX4O95219 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SNX4O95219 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX4O95219 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms