Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 KRT87P-202ENST00000534226 1464 ntBASIC18.78■□□□□ 0.6
KRT33AO76009 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
KRT33AO76009 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KRT33AO76009 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT33AO76009 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
KRT33AO76009 AC026471.6-201ENST00000622954 1905 ntBASIC18.78■□□□□ 0.6
KRT33AO76009 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 AC003102.1-202ENST00000563394 1796 ntBASIC18.78■□□□□ 0.6
KRT33AO76009 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT33AO76009 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT33AO76009 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT33AO76009 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT33AO76009 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.77■□□□□ 0.6
KRT33AO76009 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT33AO76009 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT33AO76009 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
KRT33AO76009 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT33AO76009 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
KRT33AO76009 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT33AO76009 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT33AO76009 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT33AO76009 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT33AO76009 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
KRT33AO76009 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.76■□□□□ 0.59
KRT33AO76009 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L2-201ENST00000561772 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.76■□□□□ 0.59
KRT33AO76009 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L6-201ENST00000626483 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L1-201ENST00000627662 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L8-201ENST00000629013 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L3-201ENST00000630187 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L7-201ENST00000630678 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 DUX4L5-201ENST00000630834 1275 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT33AO76009 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 AC092667.1-201ENST00000434301 2586 ntBASIC18.76■□□□□ 0.59
KRT33AO76009 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT33AO76009 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT33AO76009 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
KRT33AO76009 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT33AO76009 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT33AO76009 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.75■□□□□ 0.59
KRT33AO76009 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
KRT33AO76009 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT33AO76009 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT33AO76009 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT33AO76009 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KRT33AO76009 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT33AO76009 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT33AO76009 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT33AO76009 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KRT33AO76009 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT33AO76009 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms