Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC126544.1-201ENST00000580842 1059 ntBASIC20.45■□□□□ 0.86
TRIM13O60858 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM13O60858 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM13O60858 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM13O60858 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM13O60858 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM13O60858 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM13O60858 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM13O60858 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM13O60858 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRIM13O60858 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRIM13O60858 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM13O60858 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM13O60858 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRIM13O60858 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRIM13O60858 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM13O60858 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM13O60858 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM13O60858 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM13O60858 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
TRIM13O60858 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM13O60858 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.43■□□□□ 0.86
TRIM13O60858 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM13O60858 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM13O60858 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM13O60858 AL391422.3-201ENST00000603791 2761 ntBASIC20.42■□□□□ 0.86
TRIM13O60858 AC005224.4-201ENST00000583262 1652 ntBASIC20.42■□□□□ 0.86
TRIM13O60858 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM13O60858 UNC93B3-201ENST00000308076 687 ntBASIC20.42■□□□□ 0.86
TRIM13O60858 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRIM13O60858 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM13O60858 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM13O60858 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRIM13O60858 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM13O60858 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM13O60858 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM13O60858 AL136116.3-201ENST00000402907 1138 ntBASIC20.41■□□□□ 0.86
TRIM13O60858 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM13O60858 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM13O60858 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM13O60858 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM13O60858 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM13O60858 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM13O60858 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM13O60858 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM13O60858 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM13O60858 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM13O60858 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM13O60858 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRIM13O60858 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM13O60858 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM13O60858 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM13O60858 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM13O60858 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM13O60858 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
TRIM13O60858 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM13O60858 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM13O60858 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM13O60858 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM13O60858 BX005040.4-201ENST00000637145 1518 ntBASIC20.39■□□□□ 0.85
TRIM13O60858 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
TRIM13O60858 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM13O60858 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM13O60858 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms