Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 AC006128.1-201ENST00000624704 1661 ntBASIC20.03■□□□□ 0.8
PRAMEF4O60810 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 AC034268.1-201ENST00000441047 882 ntBASIC20.03■□□□□ 0.8
PRAMEF4O60810 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 NTF6G-201ENST00000591094 616 ntBASIC20.03■□□□□ 0.8
PRAMEF4O60810 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF4O60810 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF4O60810 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF4O60810 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAMEF4O60810 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PRAMEF4O60810 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PRAMEF4O60810 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF4O60810 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF4O60810 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF4O60810 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PRAMEF4O60810 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF4O60810 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF4O60810 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEF4O60810 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 RARRES2P6-201ENST00000567333 442 ntBASIC20.01■□□□□ 0.79
PRAMEF4O60810 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF4O60810 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF4O60810 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
PRAMEF4O60810 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PRAMEF4O60810 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF4O60810 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PRAMEF4O60810 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF4O60810 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20■□□□□ 0.79
PRAMEF4O60810 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PRAMEF4O60810 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PRAMEF4O60810 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF4O60810 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 KRT18P20-201ENST00000548986 1279 ntBASIC19.99■□□□□ 0.79
PRAMEF4O60810 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRAMEF4O60810 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PRAMEF4O60810 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF4O60810 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF4O60810 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF4O60810 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.98■□□□□ 0.79
PRAMEF4O60810 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEF4O60810 KRT19P1-201ENST00000405746 1186 ntBASIC19.98■□□□□ 0.79
PRAMEF4O60810 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PRAMEF4O60810 KRT18P5-201ENST00000436075 1291 ntBASIC19.98■□□□□ 0.79
PRAMEF4O60810 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.98■□□□□ 0.79
PRAMEF4O60810 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms