Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
GRIN3BO60391 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
GRIN3BO60391 TERF1P1-201ENST00000311003 1181 ntBASIC25.65■■□□□ 1.7
GRIN3BO60391 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
GRIN3BO60391 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.65■■□□□ 1.7
GRIN3BO60391 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
GRIN3BO60391 KRT126P-201ENST00000549467 1181 ntBASIC25.65■■□□□ 1.7
GRIN3BO60391 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
GRIN3BO60391 LINC01568-207ENST00000641790 1380 ntBASIC25.65■■□□□ 1.7
GRIN3BO60391 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3BO60391 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3BO60391 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.64■■□□□ 1.7
GRIN3BO60391 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3BO60391 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3BO60391 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.64■■□□□ 1.7
GRIN3BO60391 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3BO60391 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
GRIN3BO60391 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.64■■□□□ 1.7
GRIN3BO60391 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
GRIN3BO60391 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.64■■□□□ 1.7
GRIN3BO60391 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
GRIN3BO60391 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.64■■□□□ 1.7
GRIN3BO60391 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.64■■□□□ 1.7
GRIN3BO60391 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.64■■□□□ 1.69
GRIN3BO60391 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.64■■□□□ 1.69
GRIN3BO60391 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
GRIN3BO60391 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.63■■□□□ 1.69
GRIN3BO60391 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
GRIN3BO60391 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
GRIN3BO60391 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.63■■□□□ 1.69
GRIN3BO60391 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.63■■□□□ 1.69
GRIN3BO60391 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
GRIN3BO60391 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.63■■□□□ 1.69
GRIN3BO60391 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.63■■□□□ 1.69
GRIN3BO60391 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.63■■□□□ 1.69
GRIN3BO60391 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
GRIN3BO60391 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 LINC00526-201ENST00000581067 1875 ntBASIC25.63■■□□□ 1.69
GRIN3BO60391 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
GRIN3BO60391 AC073508.3-201ENST00000619697 1419 ntBASIC25.63■■□□□ 1.69
GRIN3BO60391 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.62■■□□□ 1.69
GRIN3BO60391 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.62■■□□□ 1.69
GRIN3BO60391 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.62■■□□□ 1.69
GRIN3BO60391 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.62■■□□□ 1.69
GRIN3BO60391 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.62■■□□□ 1.69
GRIN3BO60391 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GRIN3BO60391 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.61■■□□□ 1.69
GRIN3BO60391 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GRIN3BO60391 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
GRIN3BO60391 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
GRIN3BO60391 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GRIN3BO60391 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GRIN3BO60391 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GRIN3BO60391 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GRIN3BO60391 UPK3BP1-201ENST00000428678 509 ntBASIC25.61■■□□□ 1.69
GRIN3BO60391 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.61■■□□□ 1.69
GRIN3BO60391 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.61■■□□□ 1.69
GRIN3BO60391 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.61■■□□□ 1.69
GRIN3BO60391 LINC01960-201ENST00000563759 1884 ntBASIC25.61■■□□□ 1.69
GRIN3BO60391 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.61■■□□□ 1.69
GRIN3BO60391 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.61■■□□□ 1.69
GRIN3BO60391 KRT18P22-201ENST00000402024 1347 ntBASIC25.61■■□□□ 1.69
GRIN3BO60391 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.6■■□□□ 1.69
GRIN3BO60391 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.6■■□□□ 1.69
GRIN3BO60391 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
GRIN3BO60391 AC104076.2-201ENST00000448912 469 ntBASIC25.6■■□□□ 1.69
GRIN3BO60391 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.6■■□□□ 1.69
GRIN3BO60391 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.6■■□□□ 1.69
GRIN3BO60391 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.6■■□□□ 1.69
GRIN3BO60391 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.6■■□□□ 1.69
GRIN3BO60391 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
GRIN3BO60391 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GRIN3BO60391 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GRIN3BO60391 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
GRIN3BO60391 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
GRIN3BO60391 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.59■■□□□ 1.69
GRIN3BO60391 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
GRIN3BO60391 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.59■■□□□ 1.69
GRIN3BO60391 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.59■■□□□ 1.69
GRIN3BO60391 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.59■■□□□ 1.69
GRIN3BO60391 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.59■■□□□ 1.69
GRIN3BO60391 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
GRIN3BO60391 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms