Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF9O60383 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF9O60383 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GDF9O60383 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF9O60383 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF9O60383 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF9O60383 MTDHP1-201ENST00000605323 784 ntBASIC20.4■□□□□ 0.86
GDF9O60383 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GDF9O60383 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GDF9O60383 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF9O60383 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF9O60383 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.39■□□□□ 0.86
GDF9O60383 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
GDF9O60383 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 KRT18P68-201ENST00000392293 1000 ntBASIC20.39■□□□□ 0.85
GDF9O60383 CDV3P1-201ENST00000471403 739 ntBASIC20.39■□□□□ 0.85
GDF9O60383 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.39■□□□□ 0.85
GDF9O60383 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.39■□□□□ 0.85
GDF9O60383 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.39■□□□□ 0.85
GDF9O60383 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GDF9O60383 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GDF9O60383 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.38■□□□□ 0.85
GDF9O60383 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GDF9O60383 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF9O60383 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
GDF9O60383 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GDF9O60383 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.37■□□□□ 0.85
GDF9O60383 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GDF9O60383 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.37■□□□□ 0.85
GDF9O60383 AL049597.2-201ENST00000565575 961 ntBASIC20.37■□□□□ 0.85
GDF9O60383 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.37■□□□□ 0.85
GDF9O60383 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF9O60383 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GDF9O60383 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.37■□□□□ 0.85
GDF9O60383 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GDF9O60383 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF9O60383 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF9O60383 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF9O60383 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.36■□□□□ 0.85
GDF9O60383 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF9O60383 AC133681.1-201ENST00000465482 601 ntBASIC20.36■□□□□ 0.85
GDF9O60383 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF9O60383 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF9O60383 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.36■□□□□ 0.85
GDF9O60383 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.36■□□□□ 0.85
GDF9O60383 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF9O60383 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF9O60383 AL353708.3-201ENST00000610272 989 ntBASIC20.36■□□□□ 0.85
GDF9O60383 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GDF9O60383 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF9O60383 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GDF9O60383 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF9O60383 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF9O60383 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 AC239809.2-201ENST00000415381 517 ntBASIC20.35■□□□□ 0.85
GDF9O60383 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
GDF9O60383 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.35■□□□□ 0.85
GDF9O60383 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.35■□□□□ 0.85
GDF9O60383 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF9O60383 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF9O60383 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.35■□□□□ 0.85
GDF9O60383 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF9O60383 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms