Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.76■□□□□ 0.43
SSX5O60225 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.76■□□□□ 0.43
SSX5O60225 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSX5O60225 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSX5O60225 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX5O60225 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSX5O60225 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX5O60225 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSX5O60225 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SSX5O60225 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX5O60225 RARRES2P1-201ENST00000474487 481 ntBASIC17.75■□□□□ 0.43
SSX5O60225 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX5O60225 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SSX5O60225 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.75■□□□□ 0.43
SSX5O60225 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.75■□□□□ 0.43
SSX5O60225 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSX5O60225 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX5O60225 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX5O60225 AP006587.3-201ENST00000525742 1516 ntBASIC17.74■□□□□ 0.43
SSX5O60225 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX5O60225 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX5O60225 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.74■□□□□ 0.43
SSX5O60225 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX5O60225 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSX5O60225 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX5O60225 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX5O60225 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SSX5O60225 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSX5O60225 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SSX5O60225 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX5O60225 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SSX5O60225 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX5O60225 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX5O60225 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSX5O60225 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX5O60225 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX5O60225 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SSX5O60225 AC027702.1-201ENST00000563810 1770 ntBASIC17.72■□□□□ 0.43
SSX5O60225 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX5O60225 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX5O60225 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX5O60225 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX5O60225 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSX5O60225 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX5O60225 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX5O60225 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SSX5O60225 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
SSX5O60225 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SSX5O60225 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms