Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.32■□□□□ 0.52
SGCEO43556 AC008175.2-201ENST00000612840 297 ntBASIC18.32■□□□□ 0.52
SGCEO43556 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.32■□□□□ 0.52
SGCEO43556 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGCEO43556 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.31■□□□□ 0.52
SGCEO43556 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SGCEO43556 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.31■□□□□ 0.52
SGCEO43556 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGCEO43556 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
SGCEO43556 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SGCEO43556 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGCEO43556 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SGCEO43556 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.3■□□□□ 0.52
SGCEO43556 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGCEO43556 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.3■□□□□ 0.52
SGCEO43556 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.3■□□□□ 0.52
SGCEO43556 POU5F1P4-201ENST00000413175 1085 ntBASIC18.3■□□□□ 0.52
SGCEO43556 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
SGCEO43556 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SGCEO43556 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SGCEO43556 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SGCEO43556 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
SGCEO43556 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGCEO43556 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SGCEO43556 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SGCEO43556 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SGCEO43556 AP004607.4-201ENST00000530158 1459 ntBASIC18.29■□□□□ 0.52
SGCEO43556 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.29■□□□□ 0.52
SGCEO43556 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SGCEO43556 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.29■□□□□ 0.52
SGCEO43556 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.29■□□□□ 0.52
SGCEO43556 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.29■□□□□ 0.52
SGCEO43556 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
SGCEO43556 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SGCEO43556 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGCEO43556 AC061975.6-201ENST00000579045 1553 ntBASIC18.29■□□□□ 0.52
SGCEO43556 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SGCEO43556 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SGCEO43556 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.28■□□□□ 0.52
SGCEO43556 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.28■□□□□ 0.52
SGCEO43556 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.28■□□□□ 0.52
SGCEO43556 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SGCEO43556 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SGCEO43556 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.28■□□□□ 0.52
SGCEO43556 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.28■□□□□ 0.52
SGCEO43556 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.28■□□□□ 0.52
SGCEO43556 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.28■□□□□ 0.52
SGCEO43556 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SGCEO43556 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SGCEO43556 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.28■□□□□ 0.52
SGCEO43556 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.28■□□□□ 0.52
SGCEO43556 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGCEO43556 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SGCEO43556 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.27■□□□□ 0.52
SGCEO43556 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.27■□□□□ 0.52
SGCEO43556 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SGCEO43556 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SGCEO43556 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.27■□□□□ 0.52
SGCEO43556 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.27■□□□□ 0.52
SGCEO43556 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.27■□□□□ 0.52
SGCEO43556 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.27■□□□□ 0.52
SGCEO43556 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.27■□□□□ 0.52
SGCEO43556 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 AC104187.1-201ENST00000607510 612 ntBASIC18.27■□□□□ 0.52
SGCEO43556 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms