Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.12■□□□□ 0.97
RIPK2O43353 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.12■□□□□ 0.97
RIPK2O43353 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.12■□□□□ 0.97
RIPK2O43353 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
RIPK2O43353 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.12■□□□□ 0.97
RIPK2O43353 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.12■□□□□ 0.97
RIPK2O43353 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.12■□□□□ 0.97
RIPK2O43353 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIPK2O43353 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RIPK2O43353 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
RIPK2O43353 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIPK2O43353 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIPK2O43353 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.11■□□□□ 0.97
RIPK2O43353 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.11■□□□□ 0.97
RIPK2O43353 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
RIPK2O43353 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
RIPK2O43353 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.11■□□□□ 0.97
RIPK2O43353 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.11■□□□□ 0.97
RIPK2O43353 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RIPK2O43353 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIPK2O43353 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
RIPK2O43353 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
RIPK2O43353 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.1■□□□□ 0.97
RIPK2O43353 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.1■□□□□ 0.97
RIPK2O43353 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.1■□□□□ 0.97
RIPK2O43353 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.1■□□□□ 0.97
RIPK2O43353 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.1■□□□□ 0.97
RIPK2O43353 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.1■□□□□ 0.97
RIPK2O43353 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIPK2O43353 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
RIPK2O43353 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.09■□□□□ 0.97
RIPK2O43353 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RIPK2O43353 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RIPK2O43353 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIPK2O43353 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.09■□□□□ 0.97
RIPK2O43353 BX005040.4-201ENST00000637145 1518 ntBASIC21.09■□□□□ 0.97
RIPK2O43353 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.08■□□□□ 0.97
RIPK2O43353 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.08■□□□□ 0.97
RIPK2O43353 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.08■□□□□ 0.97
RIPK2O43353 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.08■□□□□ 0.97
RIPK2O43353 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIPK2O43353 AC011298.3-201ENST00000615796 283 ntBASIC21.08■□□□□ 0.97
RIPK2O43353 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RIPK2O43353 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.08■□□□□ 0.96
RIPK2O43353 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RIPK2O43353 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK2O43353 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.07■□□□□ 0.96
RIPK2O43353 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK2O43353 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.07■□□□□ 0.96
RIPK2O43353 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.07■□□□□ 0.96
RIPK2O43353 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.07■□□□□ 0.96
RIPK2O43353 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RIPK2O43353 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK2O43353 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
RIPK2O43353 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.06■□□□□ 0.96
RIPK2O43353 DUX4L19-201ENST00000557448 1267 ntBASIC21.06■□□□□ 0.96
RIPK2O43353 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK2O43353 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms