Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.03■■□□□ 1.6
RNF113AO15541 CROCCP5-201ENST00000436658 830 ntBASIC25.03■■□□□ 1.6
RNF113AO15541 AC090192.1-201ENST00000517740 490 ntBASIC25.03■■□□□ 1.6
RNF113AO15541 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF113AO15541 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.03■■□□□ 1.6
RNF113AO15541 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF113AO15541 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF113AO15541 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
RNF113AO15541 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF113AO15541 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF113AO15541 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RNF113AO15541 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RNF113AO15541 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF113AO15541 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF113AO15541 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF113AO15541 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF113AO15541 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF113AO15541 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
RNF113AO15541 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF113AO15541 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF113AO15541 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 AL591742.1-201ENST00000604433 565 ntBASIC25.01■■□□□ 1.59
RNF113AO15541 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF113AO15541 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF113AO15541 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
RNF113AO15541 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF113AO15541 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF113AO15541 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25■■□□□ 1.59
RNF113AO15541 APTR-203ENST00000430801 583 ntTSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 AC005181.1-201ENST00000604782 1256 ntBASIC25■■□□□ 1.59
RNF113AO15541 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
RNF113AO15541 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25■■□□□ 1.59
RNF113AO15541 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF113AO15541 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF113AO15541 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF113AO15541 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF113AO15541 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF113AO15541 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RNF113AO15541 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RNF113AO15541 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF113AO15541 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF113AO15541 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.99■■□□□ 1.59
RNF113AO15541 AL050303.2-201ENST00000619798 666 ntBASIC24.99■■□□□ 1.59
RNF113AO15541 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF113AO15541 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF113AO15541 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF113AO15541 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF113AO15541 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF113AO15541 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF113AO15541 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF113AO15541 AC005229.4-201ENST00000610085 2198 ntBASIC24.98■■□□□ 1.59
RNF113AO15541 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF113AO15541 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 MIR663A-201ENST00000385250 93 ntBASIC24.97■■□□□ 1.59
RNF113AO15541 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 AL162412.1-201ENST00000567129 965 ntBASIC24.97■■□□□ 1.59
RNF113AO15541 AC016405.3-201ENST00000607710 860 ntBASIC24.97■■□□□ 1.59
RNF113AO15541 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF113AO15541 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RNF113AO15541 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
RNF113AO15541 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF113AO15541 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF113AO15541 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF113AO15541 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF113AO15541 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF113AO15541 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF113AO15541 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF113AO15541 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF113AO15541 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms