Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.66■□□□□ 0.74
CLOCKO15516 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLOCKO15516 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 AC006455.2-201ENST00000429931 906 ntBASIC19.66■□□□□ 0.74
CLOCKO15516 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.66■□□□□ 0.74
CLOCKO15516 AC099791.2-201ENST00000605725 427 ntBASIC19.66■□□□□ 0.74
CLOCKO15516 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLOCKO15516 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.66■□□□□ 0.74
CLOCKO15516 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLOCKO15516 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.66■□□□□ 0.74
CLOCKO15516 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
CLOCKO15516 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.65■□□□□ 0.74
CLOCKO15516 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CLOCKO15516 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.65■□□□□ 0.74
CLOCKO15516 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.65■□□□□ 0.74
CLOCKO15516 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.65■□□□□ 0.74
CLOCKO15516 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.65■□□□□ 0.74
CLOCKO15516 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.65■□□□□ 0.74
CLOCKO15516 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLOCKO15516 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.64■□□□□ 0.74
CLOCKO15516 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.64■□□□□ 0.74
CLOCKO15516 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLOCKO15516 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 EDA-201ENST00000338901 1233 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.64■□□□□ 0.73
CLOCKO15516 pRNA.6-201ENST00000610482 90 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 pRNA.5-201ENST00000612139 90 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 pRNA.11-201ENST00000618423 90 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 pRNA.13-201ENST00000619112 90 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 AL355001.2-201ENST00000620617 1191 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 AC068587.7-201ENST00000641602 218 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.64■□□□□ 0.73
CLOCKO15516 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 AC003102.1-202ENST00000563394 1796 ntBASIC19.64■□□□□ 0.73
CLOCKO15516 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.64■□□□□ 0.73
CLOCKO15516 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CLOCKO15516 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLOCKO15516 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLOCKO15516 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.63■□□□□ 0.73
CLOCKO15516 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.63■□□□□ 0.73
CLOCKO15516 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.63■□□□□ 0.73
CLOCKO15516 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLOCKO15516 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLOCKO15516 PLK5-205ENST00000642079 1969 ntBASIC19.63■□□□□ 0.73
CLOCKO15516 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.62■□□□□ 0.73
CLOCKO15516 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.62■□□□□ 0.73
CLOCKO15516 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.62■□□□□ 0.73
CLOCKO15516 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.62■□□□□ 0.73
CLOCKO15516 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLOCKO15516 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
CLOCKO15516 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CLOCKO15516 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.62■□□□□ 0.73
CLOCKO15516 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.62■□□□□ 0.73
CLOCKO15516 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CLOCKO15516 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.62■□□□□ 0.73
CLOCKO15516 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.62■□□□□ 0.73
CLOCKO15516 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms