Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA1O15239 GUSBP5-201ENST00000418136 578 ntBASIC14.19□□□□□ -0.14
NDUFA1O15239 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 OR2I1P-207ENST00000453522 948 ntBASIC14.19□□□□□ -0.14
NDUFA1O15239 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.19□□□□□ -0.14
NDUFA1O15239 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA1O15239 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA1O15239 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA1O15239 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NDUFA1O15239 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 AL391422.3-201ENST00000603791 2761 ntBASIC14.18□□□□□ -0.14
NDUFA1O15239 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.18□□□□□ -0.14
NDUFA1O15239 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA1O15239 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA1O15239 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
NDUFA1O15239 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 MIR3181-201ENST00000578512 73 ntBASIC14.18□□□□□ -0.14
NDUFA1O15239 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.18□□□□□ -0.14
NDUFA1O15239 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA1O15239 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA1O15239 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA1O15239 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA1O15239 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NDUFA1O15239 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA1O15239 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA1O15239 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA1O15239 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.17□□□□□ -0.14
NDUFA1O15239 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.17□□□□□ -0.14
NDUFA1O15239 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA1O15239 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA1O15239 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA1O15239 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NDUFA1O15239 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA1O15239 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFA1O15239 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 AC010141.3-201ENST00000456659 717 ntBASIC14.16□□□□□ -0.14
NDUFA1O15239 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NDUFA1O15239 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.16□□□□□ -0.14
NDUFA1O15239 DUX4L19-201ENST00000557448 1267 ntBASIC14.16□□□□□ -0.14
NDUFA1O15239 AL034346.1-201ENST00000568244 1277 ntBASIC14.16□□□□□ -0.14
NDUFA1O15239 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NDUFA1O15239 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NDUFA1O15239 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFA1O15239 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms