Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHL1O00533 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CHL1O00533 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.91■■□□□ 1.9
CHL1O00533 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHL1O00533 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHL1O00533 AC010980.2-201ENST00000587099 1412 ntBASIC26.9■■□□□ 1.9
CHL1O00533 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.9■■□□□ 1.9
CHL1O00533 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.9■■□□□ 1.9
CHL1O00533 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
CHL1O00533 AL355802.2-201ENST00000402069 882 ntBASIC26.9■■□□□ 1.9
CHL1O00533 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.9■■□□□ 1.9
CHL1O00533 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CHL1O00533 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHL1O00533 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.89■■□□□ 1.9
CHL1O00533 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.89■■□□□ 1.9
CHL1O00533 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CHL1O00533 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CHL1O00533 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.89■■□□□ 1.9
CHL1O00533 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
CHL1O00533 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CHL1O00533 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
CHL1O00533 MKRN4P-201ENST00000444706 1521 ntBASIC26.89■■□□□ 1.89
CHL1O00533 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CHL1O00533 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 MIPEPP3-201ENST00000412105 444 ntBASIC26.88■■□□□ 1.89
CHL1O00533 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CHL1O00533 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.88■■□□□ 1.89
CHL1O00533 CDV3P1-201ENST00000471403 739 ntBASIC26.88■■□□□ 1.89
CHL1O00533 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.88■■□□□ 1.89
CHL1O00533 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.88■■□□□ 1.89
CHL1O00533 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CHL1O00533 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.88■■□□□ 1.89
CHL1O00533 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CHL1O00533 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.88■■□□□ 1.89
CHL1O00533 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHL1O00533 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.87■■□□□ 1.89
CHL1O00533 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHL1O00533 SLC29A4P1-201ENST00000398760 971 ntBASIC26.87■■□□□ 1.89
CHL1O00533 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.87■■□□□ 1.89
CHL1O00533 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CHL1O00533 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHL1O00533 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHL1O00533 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHL1O00533 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHL1O00533 AL024507.2-201ENST00000606070 2574 ntBASIC26.86■■□□□ 1.89
CHL1O00533 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHL1O00533 AC073210.2-201ENST00000430369 194 ntBASIC26.86■■□□□ 1.89
CHL1O00533 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHL1O00533 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.86■■□□□ 1.89
CHL1O00533 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.86■■□□□ 1.89
CHL1O00533 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.86■■□□□ 1.89
CHL1O00533 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CHL1O00533 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHL1O00533 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHL1O00533 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.86■■□□□ 1.89
CHL1O00533 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.85■■□□□ 1.89
CHL1O00533 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.85■■□□□ 1.89
CHL1O00533 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.85■■□□□ 1.89
CHL1O00533 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 AC007322.3-201ENST00000426526 701 ntBASIC26.85■■□□□ 1.89
CHL1O00533 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.85■■□□□ 1.89
CHL1O00533 AC098934.4-201ENST00000564127 592 ntBASIC26.85■■□□□ 1.89
CHL1O00533 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.85■■□□□ 1.89
CHL1O00533 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.85■■□□□ 1.89
CHL1O00533 AC100791.3-201ENST00000617619 330 ntBASIC26.85■■□□□ 1.89
CHL1O00533 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CHL1O00533 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHL1O00533 AC116050.2-201ENST00000612102 1779 ntBASIC26.84■■□□□ 1.89
CHL1O00533 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHL1O00533 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.84■■□□□ 1.89
CHL1O00533 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.84■■□□□ 1.89
CHL1O00533 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHL1O00533 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.84■■□□□ 1.89
CHL1O00533 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHL1O00533 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CHL1O00533 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CHL1O00533 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHL1O00533 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
CHL1O00533 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHL1O00533 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHL1O00533 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms