Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.34■□□□□ 0.85
EIF3FO00303 RARRES2P6-201ENST00000567333 442 ntBASIC20.34■□□□□ 0.85
EIF3FO00303 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.34■□□□□ 0.85
EIF3FO00303 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
EIF3FO00303 AC006128.1-201ENST00000624704 1661 ntBASIC20.33■□□□□ 0.85
EIF3FO00303 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3FO00303 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3FO00303 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3FO00303 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.33■□□□□ 0.85
EIF3FO00303 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EIF3FO00303 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EIF3FO00303 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
EIF3FO00303 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EIF3FO00303 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3FO00303 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
EIF3FO00303 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3FO00303 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.32■□□□□ 0.84
EIF3FO00303 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EIF3FO00303 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3FO00303 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
EIF3FO00303 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3FO00303 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
EIF3FO00303 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3FO00303 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
EIF3FO00303 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.31■□□□□ 0.84
EIF3FO00303 KRT18P11-201ENST00000435214 1283 ntBASIC20.31■□□□□ 0.84
EIF3FO00303 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
EIF3FO00303 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.31■□□□□ 0.84
EIF3FO00303 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3FO00303 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3FO00303 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.31■□□□□ 0.84
EIF3FO00303 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.31■□□□□ 0.84
EIF3FO00303 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
EIF3FO00303 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 PKD1P6-201ENST00000343738 4769 ntBASIC20.31■□□□□ 0.84
EIF3FO00303 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3FO00303 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3FO00303 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3FO00303 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EIF3FO00303 RBM17P2-201ENST00000616397 1405 ntBASIC20.3■□□□□ 0.84
EIF3FO00303 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.3■□□□□ 0.84
EIF3FO00303 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3FO00303 PLK5-205ENST00000642079 1969 ntBASIC20.3■□□□□ 0.84
EIF3FO00303 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EIF3FO00303 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3FO00303 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EIF3FO00303 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3FO00303 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.29■□□□□ 0.84
EIF3FO00303 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.29■□□□□ 0.84
EIF3FO00303 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.29■□□□□ 0.84
EIF3FO00303 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3FO00303 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.29■□□□□ 0.84
EIF3FO00303 MYCNOS-205ENST00000641950 531 ntBASIC20.29■□□□□ 0.84
EIF3FO00303 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3FO00303 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms