Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TLR4O00206 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
TLR4O00206 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 ECEL1P1-201ENST00000373592 1742 ntBASIC20.61■□□□□ 0.89
TLR4O00206 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.61■□□□□ 0.89
TLR4O00206 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR4O00206 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR4O00206 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
TLR4O00206 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TLR4O00206 ESRRAP1-201ENST00000400596 1257 ntBASIC20.61■□□□□ 0.89
TLR4O00206 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TLR4O00206 AC091799.1-201ENST00000422823 811 ntBASIC20.61■□□□□ 0.89
TLR4O00206 AC245052.3-201ENST00000450182 901 ntBASIC20.61■□□□□ 0.89
TLR4O00206 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.61■□□□□ 0.89
TLR4O00206 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.61■□□□□ 0.89
TLR4O00206 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR4O00206 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.61■□□□□ 0.89
TLR4O00206 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.61■□□□□ 0.89
TLR4O00206 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.61■□□□□ 0.89
TLR4O00206 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TLR4O00206 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.61■□□□□ 0.89
TLR4O00206 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.61■□□□□ 0.89
TLR4O00206 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TLR4O00206 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TLR4O00206 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.6■□□□□ 0.89
TLR4O00206 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.6■□□□□ 0.89
TLR4O00206 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.6■□□□□ 0.89
TLR4O00206 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.6■□□□□ 0.89
TLR4O00206 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.6■□□□□ 0.89
TLR4O00206 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 FAM21FP-204ENST00000608637 956 ntBASIC20.6■□□□□ 0.89
TLR4O00206 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
TLR4O00206 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 AC026471.6-201ENST00000622954 1905 ntBASIC20.6■□□□□ 0.89
TLR4O00206 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TLR4O00206 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TLR4O00206 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TLR4O00206 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.59■□□□□ 0.89
TLR4O00206 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.59■□□□□ 0.89
TLR4O00206 CDV3P1-201ENST00000471403 739 ntBASIC20.59■□□□□ 0.89
TLR4O00206 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 AC093827.2-201ENST00000512654 315 ntBASIC20.59■□□□□ 0.89
TLR4O00206 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.59■□□□□ 0.89
TLR4O00206 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.59■□□□□ 0.89
TLR4O00206 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TLR4O00206 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TLR4O00206 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TLR4O00206 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.58■□□□□ 0.89
TLR4O00206 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.58■□□□□ 0.89
TLR4O00206 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
TLR4O00206 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.58■□□□□ 0.89
TLR4O00206 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.58■□□□□ 0.89
TLR4O00206 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.58■□□□□ 0.89
TLR4O00206 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.58■□□□□ 0.89
TLR4O00206 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TLR4O00206 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms