Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV27A0A0K0K1C4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 AL512408.1-201ENST00000569378 2000 ntBASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV27A0A0K0K1C4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 MIR3621-201ENST00000580529 85 ntBASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV27A0A0K0K1C4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 FP700111.2-201ENST00000619190 1892 ntBASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 AC136469.2-201ENST00000623944 1028 ntBASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV27A0A0K0K1C4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 DUX4L19-201ENST00000557448 1267 ntBASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 AC099778.1-201ENST00000568593 1911 ntBASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV27A0A0K0K1C4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 SLC47A1P1-202ENST00000449666 945 ntBASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 SMUG1P1-201ENST00000590640 811 ntBASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 AC011298.3-201ENST00000615796 283 ntBASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 AC112907.3-201ENST00000577781 2400 ntBASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms