Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 AL034346.1-201ENST00000568244 1277 ntBASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV12-1A0A0B4J245 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
TRAV12-1A0A0B4J245 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-1A0A0B4J245 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-1A0A0B4J245 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-1A0A0B4J245 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV12-1A0A0B4J245 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 AC003102.1-202ENST00000563394 1796 ntBASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 AP000974.1-201ENST00000623909 2387 ntBASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 AL499627.2-201ENST00000606283 725 ntBASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV12-1A0A0B4J245 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-1A0A0B4J245 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms