Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC061975.6-201ENST00000579045 1553 ntBASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 AP001330.3-201ENST00000520123 633 ntBASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV5-3A0A0A0MS03 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV5-3A0A0A0MS03 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TRBV5-3A0A0A0MS03 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TRBV5-3A0A0A0MS03 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-3A0A0A0MS03 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 AFG3L1P-217ENST00000557444 2447 ntBASIC19.5■□□□□ 0.71
TRBV5-3A0A0A0MS03 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 AP004607.4-201ENST00000530158 1459 ntBASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-3A0A0A0MS03 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-3A0A0A0MS03 AC012414.1-201ENST00000556676 535 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms