Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-2A0A087WT02 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-2A0A087WT02 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-2A0A087WT02 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 AP005212.1-201ENST00000581547 1997 ntBASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-2A0A087WT02 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 AC144652.1-201ENST00000609974 1624 ntBASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 AC241377.3-202ENST00000626088 1088 ntBASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 AC241585.3-202ENST00000628937 1088 ntBASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 AC245100.8-202ENST00000629247 1058 ntBASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-2A0A087WT02 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV9-2A0A087WT02 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms