Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC012558.1-201ENST00000451946 622 ntTSL 3 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 SNX18P7-201ENST00000454116 635 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 HIST1H2APS5-201ENST00000454320 369 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 RN7SL167P-201ENST00000498381 302 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AP001880.1-201ENST00000538772 421 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC027088.2-201ENST00000559870 916 ntTSL 3 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC024267.5-201ENST00000579154 599 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC008555.5-201ENST00000603718 515 ntTSL 2 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 uc_338.35-201ENST00000616802 163 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 FAM74A4-202ENST00000618177 469 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 OR2T32P-202ENST00000642003 1114 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 WSCD2-207ENST00000549903 3534 ntTSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 ZFP57-202ENST00000376883 1980 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 AC025678.3-201ENST00000623619 4824 ntBASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 SLC24A5-201ENST00000341459 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 BLNK-201ENST00000224337 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NPIPA3F8WFD2 TRPV1-202ENST00000399756 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ZFYVE1-203ENST00000553891 3244 ntTSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 FCRLA-201ENST00000236938 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 OPRM1-202ENST00000330432 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TNC-210ENST00000535648 7508 ntTSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TTC5-201ENST00000258821 4779 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ENTPD3-AS1-202ENST00000425156 2036 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 KRTAP9-8-201ENST00000254072 960 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CCL27-201ENST00000259631 446 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 APOL4-201ENST00000328429 844 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 HFE-206ENST00000353147 809 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 RN7SKP165-201ENST00000411350 356 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 KRTAP9-3-201ENST00000411528 992 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 KRTAP8-3P-201ENST00000423658 188 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 HNRNPH3P1-201ENST00000431935 583 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 OR52P1P-201ENST00000438474 963 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 DNM1P24-201ENST00000441091 490 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TRBV22OR9-2-201ENST00000441373 136 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AL357079.1-202ENST00000445226 294 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 RPSAP34-201ENST00000476193 736 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CCDC169-210ENST00000491049 753 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC008525.1-201ENST00000508719 676 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC112206.2-202ENST00000514368 756 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 SNORA33.3-201ENST00000516236 136 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 LINC00051-201ENST00000517704 1046 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 VN1R46P-201ENST00000519939 850 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 LINC01485-203ENST00000522571 557 ntTSL 4 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC018552.2-201ENST00000563062 804 ntTSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC016168.2-202ENST00000564292 610 ntTSL 3 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TP53TG3D-207ENST00000569631 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC010319.5-201ENST00000598950 759 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 WT1-AS_1.1-201ENST00000619639 109 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC015978.1-201ENST00000635343 890 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC135068.10-201ENST00000638015 913 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CYP2F2P-202ENST00000641827 1004 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 MAPK4-205ENST00000588540 3144 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 FGFR2-202ENST00000346997 2472 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 FGFR2-203ENST00000351936 2478 ntTSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 GDAP1-201ENST00000220822 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC007848.2-201ENST00000543308 1727 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 POTEA-201ENST00000519951 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 LINC00941-201ENST00000547804 1645 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC099811.6-201ENST00000624554 1638 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 AC026336.3-201ENST00000611525 2076 ntBASIC9.16□□□□□ -0.94
NPIPA3F8WFD2 MYOF-204ENST00000371489 1519 ntTSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 458 ms