Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C6orf203-204ENST00000625458 1146 ntTSL 3 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC004877.1-201ENST00000608963 4093 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 SAMD7-201ENST00000335556 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 HDAC9-210ENST00000428307 2359 ntTSL 2 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 UPRT-203ENST00000373383 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 AC104024.2-201ENST00000562897 3077 ntBASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 DCAF13-205ENST00000521971 2049 ntTSL 5 BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
NPIPA3F8WFD2 BTBD18-201ENST00000422652 3044 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 PGR-207ENST00000534013 1901 ntTSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CD36-222ENST00000538969 1922 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CD36-223ENST00000544133 1914 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 FAM186B-205ENST00000551047 2173 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 RNF185-201ENST00000266252 2946 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 KCTD1-201ENST00000317932 1715 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 ELOB-201ENST00000262306 582 ntTSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 MMP26-201ENST00000300762 989 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 TEX37-201ENST00000303254 795 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 OR52K2-201ENST00000325719 1067 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 ALKAL2-203ENST00000401503 748 ntTSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AL157401.1-201ENST00000419836 344 ntTSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AC008074.2-201ENST00000425381 429 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 RPL10P1-201ENST00000447844 644 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 RFTN1P1-202ENST00000455527 996 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AP002986.1-202ENST00000532116 669 ntTSL 3 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 HPR-202ENST00000540303 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 LINC01730-201ENST00000613868 843 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AC027228.3-201ENST00000623556 1266 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AL583859.3-201ENST00000623982 1068 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AC091939.1-202ENST00000642039 795 ntBASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 FCRLA-214ENST00000546024 2077 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CD2BP2-201ENST00000305596 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 TSSK4-202ENST00000339917 1321 ntAPPRIS ALT1 TSL 2 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 LTA4H-201ENST00000228740 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 GIT2-216ENST00000551209 2127 ntTSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 CRTAM-203ENST00000533709 1929 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
NPIPA3F8WFD2 AP002008.3-201ENST00000528614 2587 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 NFYC-212ENST00000440226 1717 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ZNF879-201ENST00000444149 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 ZNF438-207ENST00000452305 3344 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CCDC32-202ENST00000416810 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 METAP2-210ENST00000551840 1874 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 USP17L14P-201ENST00000504838 1593 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 RNA5SP488-201ENST00000364942 116 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC073091.1-201ENST00000398059 864 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 SNORD88C-201ENST00000408061 91 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 GEMIN6-202ENST00000409011 1210 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC073957.1-201ENST00000418941 535 ntTSL 3 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 IGKV1D-39-201ENST00000448155 376 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 TUBBP2-201ENST00000454403 411 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AL441964.1-201ENST00000454528 658 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AC016820.1-201ENST00000455498 579 ntTSL 2 BASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 RPL7AP57-201ENST00000497708 784 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 AL662844.2-201ENST00000538455 284 ntBASIC9.22□□□□□ -0.93
NPIPA3F8WFD2 FAM181A-AS1-204ENST00000556290 526 ntTSL 4 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 328.5 ms