Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 AL591742.1-201ENST00000604433 565 ntBASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DNMT3AQ9Y6K1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 AC091799.1-201ENST00000422823 811 ntBASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 AC068338.2-201ENST00000563278 1430 ntBASIC20.44■□□□□ 0.86
DNMT3AQ9Y6K1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DNMT3AQ9Y6K1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 AC005181.1-201ENST00000604782 1256 ntBASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 LINC00565-201ENST00000562710 2331 ntBASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DNMT3AQ9Y6K1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 CROCCP5-201ENST00000436658 830 ntBASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DNMT3AQ9Y6K1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms