Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC6Q9Y625 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC6Q9Y625 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
GPC6Q9Y625 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.62■□□□□ 0.73
GPC6Q9Y625 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GPC6Q9Y625 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
GPC6Q9Y625 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
GPC6Q9Y625 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GPC6Q9Y625 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 AC105233.4-201ENST00000642045 216 ntBASIC19.6■□□□□ 0.73
GPC6Q9Y625 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GPC6Q9Y625 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GPC6Q9Y625 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GPC6Q9Y625 IRS3P-201ENST00000223076 1006 ntBASIC19.59■□□□□ 0.73
GPC6Q9Y625 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.59■□□□□ 0.73
GPC6Q9Y625 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
GPC6Q9Y625 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.58■□□□□ 0.73
GPC6Q9Y625 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
GPC6Q9Y625 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.58■□□□□ 0.73
GPC6Q9Y625 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
GPC6Q9Y625 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
GPC6Q9Y625 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GPC6Q9Y625 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GPC6Q9Y625 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.58■□□□□ 0.72
GPC6Q9Y625 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC6Q9Y625 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GPC6Q9Y625 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC6Q9Y625 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC6Q9Y625 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.57■□□□□ 0.72
GPC6Q9Y625 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GPC6Q9Y625 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms