Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 AL121832.2-201ENST00000610979 668 ntBASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB1Q9Y5F3 KRT87P-202ENST00000534226 1464 ntBASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 AC083906.2-201ENST00000511578 360 ntBASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 AC104187.1-201ENST00000607510 612 ntBASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB1Q9Y5F3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 AC066615.1-201ENST00000640911 628 ntBASIC20.83■□□□□ 0.93
PCDHB1Q9Y5F3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB1Q9Y5F3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHB1Q9Y5F3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB1Q9Y5F3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 TSPY6P-201ENST00000448518 926 ntBASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB1Q9Y5F3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 AL024507.2-201ENST00000606070 2574 ntBASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 GUSBP6-202ENST00000438529 1198 ntBASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 KRT18P6-201ENST00000555540 1265 ntBASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB1Q9Y5F3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 AL138781.1-201ENST00000566567 1274 ntBASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms