Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB11Q9Y5F2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 AC138907.5-202ENST00000569484 235 ntBASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 MYCNOS-205ENST00000641950 531 ntBASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB11Q9Y5F2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB11Q9Y5F2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 KRT18P20-201ENST00000548986 1279 ntBASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 KRT18P6-201ENST00000555540 1265 ntBASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB11Q9Y5F2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 TSPY20P-201ENST00000450910 630 ntBASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 DUX4L16-201ENST00000555130 1264 ntBASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB11Q9Y5F2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 AC010141.2-201ENST00000452426 721 ntBASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB11Q9Y5F2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB11Q9Y5F2 AC008175.2-201ENST00000612840 297 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms