Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 MIPEPP3-201ENST00000412105 444 ntBASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 AC069152.1-201ENST00000438030 544 ntBASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 AC133041.1-202ENST00000642053 222 ntBASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00588Q9Y4M8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 CDV3P1-201ENST00000471403 739 ntBASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 MIR4758-201ENST00000577688 71 ntBASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00588Q9Y4M8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 BX276092.2-201ENST00000417668 665 ntBASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 AC098934.4-201ENST00000564127 592 ntBASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00588Q9Y4M8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 AC010980.2-201ENST00000587099 1412 ntBASIC14.27□□□□□ -0.12
LINC00588Q9Y4M8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 AC073210.2-201ENST00000430369 194 ntBASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 FAM21FP-204ENST00000608637 956 ntBASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINC00588Q9Y4M8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 CD99P1-205ENST00000527459 561 ntBASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00588Q9Y4M8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms