Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EXOSC1Q9Y3B2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.63■□□□□ 0.57
EXOSC1Q9Y3B2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 AC092171.4-201ENST00000609130 632 ntBASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.62■□□□□ 0.57
EXOSC1Q9Y3B2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC1Q9Y3B2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 AP005435.1-201ENST00000529293 1178 ntBASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 PCDHAC2-203ENST00000615316 3011 ntBASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EXOSC1Q9Y3B2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC1Q9Y3B2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms