Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 AC008764.7-201ENST00000593779 1081 ntBASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CAPN11Q9UMQ6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.54■■□□□ 1.2
CAPN11Q9UMQ6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CAPN11Q9UMQ6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 AC099791.1-201ENST00000416440 715 ntBASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 TSPY26P-201ENST00000476365 1326 ntBASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CAPN11Q9UMQ6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CAPN11Q9UMQ6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CAPN11Q9UMQ6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CAPN11Q9UMQ6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.49■■□□□ 1.19
CAPN11Q9UMQ6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms