Protein–RNA interactions for Protein: Q9UBW8

COPS7A, COP9 signalosome complex subunit 7a, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7AQ9UBW8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COPS7AQ9UBW8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COPS7AQ9UBW8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
COPS7AQ9UBW8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COPS7AQ9UBW8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
COPS7AQ9UBW8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 AC231657.2-201ENST00000624556 255 ntBASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 AC013268.1-206ENST00000638368 961 ntBASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 AC112229.1-201ENST00000639295 961 ntBASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.43■□□□□ 0.7
COPS7AQ9UBW8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 TERF1P5-201ENST00000477545 1207 ntBASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 AC073111.5-205ENST00000641717 521 ntBASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPS7AQ9UBW8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS7AQ9UBW8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms