Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MIR4767-201ENST00000582827 78 ntBASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 UNC93B3-201ENST00000308076 687 ntBASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 AP006587.3-201ENST00000525742 1516 ntBASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CPSF2Q9P2I0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 AC131212.1-201ENST00000613771 668 ntBASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF2Q9P2I0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF2Q9P2I0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 BX842568.3-201ENST00000418104 571 ntBASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CPSF2Q9P2I0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF2Q9P2I0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms