Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PARPBPQ9NWS1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 AC006015.1-201ENST00000429970 570 ntBASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 AC092666.2-201ENST00000613287 246 ntBASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PARPBPQ9NWS1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 AC061975.6-201ENST00000579045 1553 ntBASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PARPBPQ9NWS1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PARPBPQ9NWS1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 UBE2DNL-204ENST00000602536 740 ntBASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 MYCNOS-205ENST00000641950 531 ntBASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PARPBPQ9NWS1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.57■□□□□ 0.56
PARPBPQ9NWS1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms