Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM248Q9NWD8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM248Q9NWD8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM248Q9NWD8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.38■■□□□ 1.01
TMEM248Q9NWD8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 CNN2P6-201ENST00000439038 900 ntBASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 AC007322.4-201ENST00000509611 723 ntBASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 AC013268.1-206ENST00000638368 961 ntBASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 AC112229.1-201ENST00000639295 961 ntBASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 AL049796.1-201ENST00000565336 1766 ntBASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM248Q9NWD8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 CDCA4P2-201ENST00000441182 718 ntBASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 AC231657.2-201ENST00000624556 255 ntBASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM248Q9NWD8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 AC091799.1-201ENST00000422823 811 ntBASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 RAP2CP1-201ENST00000605103 478 ntBASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM248Q9NWD8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM248Q9NWD8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
TMEM248Q9NWD8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM248Q9NWD8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM248Q9NWD8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM248Q9NWD8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM248Q9NWD8 AC007375.3-201ENST00000600936 2314 ntBASIC21.33■■□□□ 1
TMEM248Q9NWD8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM248Q9NWD8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
TMEM248Q9NWD8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.32■■□□□ 1
TMEM248Q9NWD8 AF106564.1-201ENST00000607058 2553 ntBASIC21.32■■□□□ 1
TMEM248Q9NWD8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TMEM248Q9NWD8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 AC007322.1-201ENST00000426983 750 ntBASIC21.32■■□□□ 1
TMEM248Q9NWD8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.32■■□□□ 1
TMEM248Q9NWD8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.32■■□□□ 1
TMEM248Q9NWD8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TMEM248Q9NWD8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM248Q9NWD8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM248Q9NWD8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM248Q9NWD8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM248Q9NWD8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TMEM248Q9NWD8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms