Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.38■□□□□ 0.69
RLIMQ9NVW2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RLIMQ9NVW2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 MIR6084-201ENST00000622012 110 ntBASIC19.36■□□□□ 0.69
RLIMQ9NVW2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
RLIMQ9NVW2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.35■□□□□ 0.69
RLIMQ9NVW2 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 AL121603.2-201ENST00000557373 2117 ntBASIC19.35■□□□□ 0.69
RLIMQ9NVW2 AL354811.1-201ENST00000610286 706 ntBASIC19.35■□□□□ 0.69
RLIMQ9NVW2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.35■□□□□ 0.69
RLIMQ9NVW2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 MIR638-201ENST00000385237 100 ntBASIC19.34■□□□□ 0.69
RLIMQ9NVW2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.34■□□□□ 0.69
RLIMQ9NVW2 AC105265.2-201ENST00000467189 838 ntBASIC19.34■□□□□ 0.69
RLIMQ9NVW2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms