Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.55■□□□□ 0.72
ZCCHC3Q9NUD5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZCCHC3Q9NUD5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 AC008175.2-201ENST00000612840 297 ntBASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ZCCHC3Q9NUD5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 AC123595.1-201ENST00000440769 1046 ntBASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 YBX1P1-201ENST00000445822 960 ntBASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ZCCHC3Q9NUD5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 ZNRF2P3-201ENST00000424200 374 ntBASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZCCHC3Q9NUD5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZCCHC3Q9NUD5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ZCCHC3Q9NUD5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZCCHC3Q9NUD5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 POU5F1P4-201ENST00000413175 1085 ntBASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 AC138907.5-202ENST00000569484 235 ntBASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZCCHC3Q9NUD5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 PLK5-205ENST00000642079 1969 ntBASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 AC006128.1-201ENST00000624704 1661 ntBASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC3Q9NUD5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms