Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 AC087623.3-201ENST00000607047 1098 ntBASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLK4Q9HAZ1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 AC079140.4-201ENST00000507448 529 ntBASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLK4Q9HAZ1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLK4Q9HAZ1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L2-201ENST00000561772 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L6-201ENST00000626483 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L1-201ENST00000627662 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L8-201ENST00000629013 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L3-201ENST00000630187 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L7-201ENST00000630678 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 DUX4L5-201ENST00000630834 1275 ntBASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.17■□□□□ 0.82
CLK4Q9HAZ1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLK4Q9HAZ1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLK4Q9HAZ1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CLK4Q9HAZ1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLK4Q9HAZ1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 KRT87P-202ENST00000534226 1464 ntBASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.14■□□□□ 0.81
CLK4Q9HAZ1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms