Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
CDH23Q9H251 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDH23Q9H251 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.39■■□□□ 1.18
CDH23Q9H251 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.39■■□□□ 1.18
CDH23Q9H251 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
CDH23Q9H251 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDH23Q9H251 AC137767.1-201ENST00000602918 1920 ntBASIC22.39■■□□□ 1.18
CDH23Q9H251 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.39■■□□□ 1.17
CDH23Q9H251 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CDH23Q9H251 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CDH23Q9H251 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.39■■□□□ 1.17
CDH23Q9H251 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDH23Q9H251 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.39■■□□□ 1.17
CDH23Q9H251 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDH23Q9H251 AC113347.1-201ENST00000413321 391 ntBASIC22.39■■□□□ 1.17
CDH23Q9H251 MIR6786-201ENST00000616843 113 ntBASIC22.39■■□□□ 1.17
CDH23Q9H251 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDH23Q9H251 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.38■■□□□ 1.17
CDH23Q9H251 AP003071.4-201ENST00000562276 1284 ntBASIC22.38■■□□□ 1.17
CDH23Q9H251 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDH23Q9H251 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
CDH23Q9H251 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.37■■□□□ 1.17
CDH23Q9H251 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
CDH23Q9H251 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDH23Q9H251 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDH23Q9H251 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDH23Q9H251 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDH23Q9H251 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDH23Q9H251 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.37■■□□□ 1.17
CDH23Q9H251 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
CDH23Q9H251 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.37■■□□□ 1.17
CDH23Q9H251 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.37■■□□□ 1.17
CDH23Q9H251 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CDH23Q9H251 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDH23Q9H251 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.36■■□□□ 1.17
CDH23Q9H251 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.36■■□□□ 1.17
CDH23Q9H251 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.36■■□□□ 1.17
CDH23Q9H251 AL589743.5-201ENST00000616611 1050 ntBASIC22.36■■□□□ 1.17
CDH23Q9H251 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.36■■□□□ 1.17
CDH23Q9H251 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.36■■□□□ 1.17
CDH23Q9H251 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDH23Q9H251 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.36■■□□□ 1.17
CDH23Q9H251 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDH23Q9H251 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDH23Q9H251 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.35■■□□□ 1.17
CDH23Q9H251 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.35■■□□□ 1.17
CDH23Q9H251 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.35■■□□□ 1.17
CDH23Q9H251 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CDH23Q9H251 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDH23Q9H251 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CDH23Q9H251 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CDH23Q9H251 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CDH23Q9H251 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDH23Q9H251 AC239809.2-201ENST00000415381 517 ntBASIC22.35■■□□□ 1.17
CDH23Q9H251 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDH23Q9H251 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.35■■□□□ 1.17
CDH23Q9H251 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 AC133681.1-201ENST00000465482 601 ntBASIC22.34■■□□□ 1.17
CDH23Q9H251 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDH23Q9H251 AC100791.3-201ENST00000617619 330 ntBASIC22.34■■□□□ 1.17
CDH23Q9H251 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.34■■□□□ 1.17
CDH23Q9H251 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.34■■□□□ 1.17
CDH23Q9H251 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDH23Q9H251 AC142381.3-201ENST00000568208 1670 ntBASIC22.34■■□□□ 1.17
CDH23Q9H251 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.33■■□□□ 1.17
CDH23Q9H251 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDH23Q9H251 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDH23Q9H251 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CDH23Q9H251 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.33■■□□□ 1.17
CDH23Q9H251 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDH23Q9H251 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDH23Q9H251 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
CDH23Q9H251 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDH23Q9H251 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CDH23Q9H251 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDH23Q9H251 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms