Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX4Q9H161 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX4Q9H161 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ALX4Q9H161 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.57■□□□□ 0.4
ALX4Q9H161 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.57■□□□□ 0.4
ALX4Q9H161 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ALX4Q9H161 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALX4Q9H161 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ALX4Q9H161 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
ALX4Q9H161 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.56■□□□□ 0.4
ALX4Q9H161 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ALX4Q9H161 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ALX4Q9H161 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.56■□□□□ 0.4
ALX4Q9H161 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.56■□□□□ 0.4
ALX4Q9H161 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALX4Q9H161 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ALX4Q9H161 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.55■□□□□ 0.4
ALX4Q9H161 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ALX4Q9H161 AC007225.1-201ENST00000566331 1836 ntBASIC17.55■□□□□ 0.4
ALX4Q9H161 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
ALX4Q9H161 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.55■□□□□ 0.4
ALX4Q9H161 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
ALX4Q9H161 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALX4Q9H161 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.54■□□□□ 0.4
ALX4Q9H161 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.54■□□□□ 0.4
ALX4Q9H161 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.54■□□□□ 0.4
ALX4Q9H161 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.54■□□□□ 0.4
ALX4Q9H161 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ALX4Q9H161 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.54■□□□□ 0.4
ALX4Q9H161 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ALX4Q9H161 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALX4Q9H161 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.53■□□□□ 0.4
ALX4Q9H161 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.53■□□□□ 0.4
ALX4Q9H161 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ALX4Q9H161 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALX4Q9H161 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ALX4Q9H161 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALX4Q9H161 AC003102.1-202ENST00000563394 1796 ntBASIC17.53■□□□□ 0.4
ALX4Q9H161 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.52■□□□□ 0.4
ALX4Q9H161 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.52■□□□□ 0.4
ALX4Q9H161 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ALX4Q9H161 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ALX4Q9H161 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.52■□□□□ 0.4
ALX4Q9H161 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALX4Q9H161 AC009102.2-201ENST00000606772 1639 ntBASIC17.52■□□□□ 0.4
ALX4Q9H161 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.52■□□□□ 0.4
ALX4Q9H161 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.52■□□□□ 0.4
ALX4Q9H161 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms