Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF2Q99805 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM9SF2Q99805 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 KRT19P1-201ENST00000405746 1186 ntBASIC19.24■□□□□ 0.67
TM9SF2Q99805 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF2Q99805 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TM9SF2Q99805 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 FEM1AP4-201ENST00000443167 1987 ntBASIC19.23■□□□□ 0.67
TM9SF2Q99805 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 AC092437.1-201ENST00000624794 1048 ntBASIC19.23■□□□□ 0.67
TM9SF2Q99805 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.23■□□□□ 0.67
TM9SF2Q99805 AC005224.4-201ENST00000583262 1652 ntBASIC19.23■□□□□ 0.67
TM9SF2Q99805 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF2Q99805 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 AP004607.4-201ENST00000530158 1459 ntBASIC19.22■□□□□ 0.67
TM9SF2Q99805 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 AC016769.1-201ENST00000409132 1010 ntBASIC19.22■□□□□ 0.67
TM9SF2Q99805 AC004911.1-201ENST00000416316 871 ntBASIC19.22■□□□□ 0.67
TM9SF2Q99805 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 RARRES2P11-201ENST00000635158 484 ntBASIC19.22■□□□□ 0.67
TM9SF2Q99805 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TM9SF2Q99805 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF2Q99805 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 AC137761.2-201ENST00000561729 223 ntBASIC19.21■□□□□ 0.67
TM9SF2Q99805 AC145350.3-201ENST00000569033 163 ntBASIC19.21■□□□□ 0.67
TM9SF2Q99805 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF2Q99805 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF2Q99805 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TM9SF2Q99805 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.2■□□□□ 0.66
TM9SF2Q99805 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF2Q99805 OR7E47P-201ENST00000546390 1422 ntBASIC19.2■□□□□ 0.66
TM9SF2Q99805 AC004854.2-201ENST00000608450 1441 ntBASIC19.2■□□□□ 0.66
TM9SF2Q99805 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms