Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL13Q99616 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL13Q99616 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL13Q99616 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCL13Q99616 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCL13Q99616 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCL13Q99616 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.46■□□□□ 0.39
CCL13Q99616 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCL13Q99616 AC006015.1-201ENST00000429970 570 ntBASIC17.46■□□□□ 0.39
CCL13Q99616 KRT18P11-201ENST00000435214 1283 ntBASIC17.46■□□□□ 0.39
CCL13Q99616 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL13Q99616 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL13Q99616 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL13Q99616 AL024507.2-201ENST00000606070 2574 ntBASIC17.45■□□□□ 0.38
CCL13Q99616 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CCL13Q99616 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL13Q99616 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 AC004911.1-201ENST00000416316 871 ntBASIC17.45■□□□□ 0.38
CCL13Q99616 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL13Q99616 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL13Q99616 AC092437.1-201ENST00000624794 1048 ntBASIC17.45■□□□□ 0.38
CCL13Q99616 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL13Q99616 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL13Q99616 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCL13Q99616 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL13Q99616 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.44■□□□□ 0.38
CCL13Q99616 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.44■□□□□ 0.38
CCL13Q99616 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.44■□□□□ 0.38
CCL13Q99616 AL137784.2-201ENST00000607332 1000 ntBASIC17.44■□□□□ 0.38
CCL13Q99616 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCL13Q99616 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL13Q99616 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL13Q99616 FEM1AP4-201ENST00000443167 1987 ntBASIC17.44■□□□□ 0.38
CCL13Q99616 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL13Q99616 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL13Q99616 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL13Q99616 AF106564.1-201ENST00000607058 2553 ntBASIC17.43■□□□□ 0.38
CCL13Q99616 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCL13Q99616 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCL13Q99616 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL13Q99616 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.43■□□□□ 0.38
CCL13Q99616 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL13Q99616 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL13Q99616 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL13Q99616 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCL13Q99616 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL13Q99616 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL13Q99616 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCL13Q99616 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.43■□□□□ 0.38
CCL13Q99616 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL13Q99616 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCL13Q99616 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCL13Q99616 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL13Q99616 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL13Q99616 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CCL13Q99616 SLC7A5P1-201ENST00000568957 537 ntBASIC17.42■□□□□ 0.38
CCL13Q99616 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 AC011767.1-201ENST00000617410 1153 ntBASIC17.42■□□□□ 0.38
CCL13Q99616 BID-214ENST00000617586 542 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL13Q99616 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms