Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SOX15-203ENST00000570788 1093 ntBASIC18.95■□□□□ 0.62
SPENQ96T58 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SPENQ96T58 AC092368.3-202ENST00000574180 1591 ntBASIC18.95■□□□□ 0.62
SPENQ96T58 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.95■□□□□ 0.62
SPENQ96T58 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.95■□□□□ 0.62
SPENQ96T58 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SPENQ96T58 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SPENQ96T58 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.95■□□□□ 0.62
SPENQ96T58 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 AC097493.4-201ENST00000641197 219 ntBASIC18.95■□□□□ 0.62
SPENQ96T58 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPENQ96T58 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.94■□□□□ 0.62
SPENQ96T58 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.94■□□□□ 0.62
SPENQ96T58 CYP2T3P-201ENST00000601990 817 ntBASIC18.94■□□□□ 0.62
SPENQ96T58 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.94■□□□□ 0.62
SPENQ96T58 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 AL591742.1-201ENST00000604433 565 ntBASIC18.94■□□□□ 0.62
SPENQ96T58 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SPENQ96T58 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.94■□□□□ 0.62
SPENQ96T58 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPENQ96T58 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.94■□□□□ 0.62
SPENQ96T58 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.94■□□□□ 0.62
SPENQ96T58 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.94■□□□□ 0.62
SPENQ96T58 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.93■□□□□ 0.62
SPENQ96T58 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SPENQ96T58 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SPENQ96T58 AC060766.5-201ENST00000590539 871 ntBASIC18.93■□□□□ 0.62
SPENQ96T58 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
SPENQ96T58 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SPENQ96T58 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPENQ96T58 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.92■□□□□ 0.62
SPENQ96T58 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.92■□□□□ 0.62
SPENQ96T58 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.92■□□□□ 0.62
SPENQ96T58 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.92■□□□□ 0.62
SPENQ96T58 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SPENQ96T58 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPENQ96T58 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.92■□□□□ 0.62
SPENQ96T58 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.92■□□□□ 0.62
SPENQ96T58 AC068473.5-201ENST00000616428 2072 ntBASIC18.91■□□□□ 0.62
SPENQ96T58 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.91■□□□□ 0.62
SPENQ96T58 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.91■□□□□ 0.62
SPENQ96T58 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 TSPY7P-201ENST00000431358 1114 ntBASIC18.91■□□□□ 0.62
SPENQ96T58 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.91■□□□□ 0.62
SPENQ96T58 AL034346.1-201ENST00000568244 1277 ntBASIC18.91■□□□□ 0.62
SPENQ96T58 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.91■□□□□ 0.62
SPENQ96T58 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 AC139530.1-201ENST00000575312 1977 ntBASIC18.91■□□□□ 0.62
SPENQ96T58 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.91■□□□□ 0.62
SPENQ96T58 AC079089.2-201ENST00000531211 1277 ntBASIC18.91■□□□□ 0.62
SPENQ96T58 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.91■□□□□ 0.62
SPENQ96T58 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SPENQ96T58 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.91■□□□□ 0.62
SPENQ96T58 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPENQ96T58 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.9■□□□□ 0.62
SPENQ96T58 KRT18P21-201ENST00000515767 1272 ntBASIC18.9■□□□□ 0.62
SPENQ96T58 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.9■□□□□ 0.62
SPENQ96T58 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.9■□□□□ 0.62
SPENQ96T58 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPENQ96T58 AC080038.3-201ENST00000623346 1952 ntBASIC18.9■□□□□ 0.62
SPENQ96T58 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.9■□□□□ 0.62
SPENQ96T58 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms