Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.48■□□□□ 0.87
PCDH15Q96QU1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 KRT17P3-201ENST00000420566 1262 ntBASIC20.48■□□□□ 0.87
PCDH15Q96QU1 AC012618.2-201ENST00000428058 849 ntBASIC20.48■□□□□ 0.87
PCDH15Q96QU1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH15Q96QU1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH15Q96QU1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 AC080038.3-201ENST00000623346 1952 ntBASIC20.46■□□□□ 0.87
PCDH15Q96QU1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 SNORA78-201ENST00000459373 127 ntBASIC20.46■□□□□ 0.87
PCDH15Q96QU1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH15Q96QU1 AC026471.6-201ENST00000622954 1905 ntBASIC20.46■□□□□ 0.87
PCDH15Q96QU1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 AC245052.3-201ENST00000450182 901 ntBASIC20.45■□□□□ 0.86
PCDH15Q96QU1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 CDV3P1-201ENST00000471403 739 ntBASIC20.45■□□□□ 0.86
PCDH15Q96QU1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 SOX15-203ENST00000570788 1093 ntBASIC20.45■□□□□ 0.86
PCDH15Q96QU1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH15Q96QU1 AL589743.5-201ENST00000616611 1050 ntBASIC20.45■□□□□ 0.86
PCDH15Q96QU1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 POM121L13P-201ENST00000422362 380 ntBASIC20.44■□□□□ 0.86
PCDH15Q96QU1 AC007322.3-201ENST00000426526 701 ntBASIC20.44■□□□□ 0.86
PCDH15Q96QU1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 Z99916.2-201ENST00000604037 246 ntBASIC20.44■□□□□ 0.86
PCDH15Q96QU1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH15Q96QU1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDH15Q96QU1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH15Q96QU1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms