Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AL162377.1-201ENST00000618844 1793 ntBASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 OR7E47P-201ENST00000546390 1422 ntBASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 TNXA-203ENST00000507684 2038 ntBASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IPQ96QF0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 AIRN-201ENST00000601203 4374 ntBASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB3IPQ96QF0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB3IPQ96QF0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 AP000974.1-201ENST00000623909 2387 ntBASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IPQ96QF0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 AL512408.1-201ENST00000569378 2000 ntBASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 AC099778.1-201ENST00000568593 1911 ntBASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 AC007225.1-201ENST00000566331 1836 ntBASIC20.27■□□□□ 0.84
RAB3IPQ96QF0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB3IPQ96QF0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RAB3IPQ96QF0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB3IPQ96QF0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB3IPQ96QF0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.27■□□□□ 0.83
RAB3IPQ96QF0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms