Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 AC138932.3-201ENST00000567634 1902 ntBASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 CLDN5-201ENST00000403084 2357 ntBASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 DUSP8P5-201ENST00000422884 1815 ntBASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 AC022211.4-201ENST00000625094 2161 ntBASIC19.97■□□□□ 0.79
CNTNAP3BQ96NU0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 AP003071.4-201ENST00000562276 1284 ntBASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 GPALPP1-207ENST00000611650 899 ntBASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 AC026471.5-201ENST00000615068 467 ntBASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 AL023875.1-201ENST00000640777 796 ntBASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP3BQ96NU0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 AL121906.2-201ENST00000621597 723 ntBASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP3BQ96NU0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP3BQ96NU0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 AL137013.1-201ENST00000432946 1228 ntBASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 AC104076.2-201ENST00000448912 469 ntBASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTNAP3BQ96NU0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms