Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CALR3Q96L12 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.03■■□□□ 1.12
CALR3Q96L12 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CALR3Q96L12 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.03■■□□□ 1.12
CALR3Q96L12 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.03■■□□□ 1.12
CALR3Q96L12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.03■■□□□ 1.12
CALR3Q96L12 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CALR3Q96L12 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CALR3Q96L12 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.02■■□□□ 1.12
CALR3Q96L12 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CALR3Q96L12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
CALR3Q96L12 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.02■■□□□ 1.12
CALR3Q96L12 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.02■■□□□ 1.12
CALR3Q96L12 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.02■■□□□ 1.12
CALR3Q96L12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CALR3Q96L12 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CALR3Q96L12 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CALR3Q96L12 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
CALR3Q96L12 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.02■■□□□ 1.11
CALR3Q96L12 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CALR3Q96L12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
CALR3Q96L12 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
CALR3Q96L12 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CALR3Q96L12 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CALR3Q96L12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.01■■□□□ 1.11
CALR3Q96L12 AC053503.5-201ENST00000601508 636 ntBASIC22.01■■□□□ 1.11
CALR3Q96L12 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.01■■□□□ 1.11
CALR3Q96L12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CALR3Q96L12 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CALR3Q96L12 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22■■□□□ 1.11
CALR3Q96L12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22■■□□□ 1.11
CALR3Q96L12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22■■□□□ 1.11
CALR3Q96L12 MIR572-201ENST00000384983 95 ntBASIC22■■□□□ 1.11
CALR3Q96L12 AC099791.1-201ENST00000416440 715 ntBASIC22■■□□□ 1.11
CALR3Q96L12 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22■■□□□ 1.11
CALR3Q96L12 AC008764.7-201ENST00000593779 1081 ntBASIC22■■□□□ 1.11
CALR3Q96L12 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22■■□□□ 1.11
CALR3Q96L12 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22■■□□□ 1.11
CALR3Q96L12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CALR3Q96L12 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CALR3Q96L12 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CALR3Q96L12 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.99■■□□□ 1.11
CALR3Q96L12 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CALR3Q96L12 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.99■■□□□ 1.11
CALR3Q96L12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.99■■□□□ 1.11
CALR3Q96L12 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 EEF1DP3-203ENST00000566025 782 ntBASIC21.99■■□□□ 1.11
CALR3Q96L12 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 TSPY26P-201ENST00000476365 1326 ntBASIC21.99■■□□□ 1.11
CALR3Q96L12 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CALR3Q96L12 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CALR3Q96L12 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CALR3Q96L12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CALR3Q96L12 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.98■■□□□ 1.11
CALR3Q96L12 EDA-201ENST00000338901 1233 ntBASIC21.98■■□□□ 1.11
CALR3Q96L12 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.98■■□□□ 1.11
CALR3Q96L12 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CALR3Q96L12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.98■■□□□ 1.11
CALR3Q96L12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.98■■□□□ 1.11
CALR3Q96L12 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 AC007225.1-201ENST00000566331 1836 ntBASIC21.98■■□□□ 1.11
CALR3Q96L12 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CALR3Q96L12 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CALR3Q96L12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CALR3Q96L12 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.97■■□□□ 1.11
CALR3Q96L12 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CALR3Q96L12 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.97■■□□□ 1.11
CALR3Q96L12 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CALR3Q96L12 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CALR3Q96L12 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms